restructure
[phd-thesis.git] / preamble.tex
1 % chktex-file 17
2 % chktex-file 15
3 % Fonts
4 \usepackage[utf8]{inputenc} % Input encoding
5 \usepackage[T2A,T1]{fontenc} % Font encoding
6 \usepackage{lmodern} % Nicer font
7 \usepackage{microtype} % Better kerning
8 \usepackage{tipa} % IPA symbols
9 \usepackage{stmaryrd} % short arrows
10 \usepackage{textcomp} % upquote
11 \usepackage{titlecaps} % titlecase commands
12 \usepackage{amsmath} % extra math
13 \usepackage{amssymb} % extra math symbols
14 \usepackage{wasysym} % circle symbols
15 \usepackage{relsize} % \smaller command
16 \usepackage{siunitx} % typeset units
17 \usepackage{xcolor} % colors
18 \DeclareSIUnit\noop{\relax}
19 \DeclareSIUnit\celcius{{}^{\circ}\kern-\scriptspace\mathsf{C}}
20 \everymath{\it\/}
21 \DeclareMathSymbol{\shortminus}{\mathbin}{AMSa}{"39} %chktex 18
22 \newcommand{\dcolon}[0]{\mathbin{::}}
23 \newcommand{\refreshrate}[2]{\langle{}#1, #2\rangle{}}
24
25 % Internationalisation
26 \usepackage[dutch,russian,british]{babel}
27 \input{hyphenation}
28 %\babelfont[russian]{rm}{Liberation Serif}
29
30 % Papersize and layout
31 \usepackage{geometry}
32 \geometry{
33 inner=25mm,
34 outer=20mm,
35 marginparsep=3mm,
36 marginparwidth=13mm,
37 top=25mm,
38 bottom=20mm,
39 paperwidth=17cm,
40 paperheight=24cm,
41 }
42 \usepackage{pdflscape}
43 \usepackage{float}
44 \usepackage{fancyhdr} % Custom headers and footers
45 %\pagestyle{headings}
46 \pagestyle{fancy}
47 \fancyhead{}
48 \fancyfoot{}
49 \setlength{\unitlength}{18mm}
50 \newcommand{\blob}{{\color{gray}\rule[-.2\unitlength]{2\unitlength}{.5\unitlength}}}
51 \fancyhead[RE]{\rightmark}
52 \fancyhead[LO]{\leftmark}
53 \newcommand{\frontmatterfancy}[0]{
54 \fancyhead[RO]{\thepage}
55 \fancyhead[LE]{\thepage}
56 }
57 \newcommand{\mainmatterfancy}[0]{
58 \fancyhead[RO]{
59 \thepage%
60 \begin{picture}(0,0)
61 \put(1,-\value{chapter}){\blob}
62 \end{picture}
63 }
64 \fancyhead[LE]{
65 \begin{picture}(0,0)
66 \put(-3,-\value{chapter}){\blob}
67 \end{picture}%
68 \thepage%
69 }
70 }
71 \newcommand{\backmatterfancy}[0]{
72 \fancyhead[RO]{
73 \thepage%
74 \begin{picture}(0,0)
75 \put(1,-1){\blob}
76 \end{picture}
77 }
78 \fancyhead[LE]{
79 \begin{picture}(0,0)
80 \put(-3,-1){\blob}
81 \end{picture}%
82 \thepage%
83 }
84 }
85 \renewcommand{\chaptermark}[1]{\markboth{\chaptername\ \thechapter.\ #1}{}}
86 \renewcommand{\sectionmark}[1]{\markright{\thesection.\ #1}}
87 %\renewcommand{\chaptermark}[1]{\markboth{\MakeUppercase{\chaptername}\ \thechapter.\ #1}{}}
88 %\renewcommand{\headrulewidth}{0pt}
89 \renewcommand{\footrulewidth}{0pt}
90 \usepackage{etoolbox} % To patch the chapter command
91 % Have better page numbering in chapters
92 \patchcmd{\chapter}{plain}{headings}{}{}
93 \usepackage{epigraph} % Epigraph
94 \renewcommand\partname{Episode} % Rename parts to episodes (rhapsody uhu)
95 \addto\captionsbritish{\renewcommand{\partname}{Episode}}
96 \usepackage{titlesec}
97 \titleformat{\part}[block]
98 {\Huge}
99 {\partname~\thepart:}
100 {20pt}
101 {}
102 % This is required to make \nameref work (https://tex.stackexchange.com/questions/211035/problems-with-nameref-not-refering-to-the-correct-label-x-titlesec)
103 \makeatletter
104 \let\titlesec@part\part%
105 \renewcommand{\part}{\@ifstar\part@star\part@nostar}
106 \def\part@star#1{\NR@gettitle{#1}\titlesec@part*{#1}}
107 \def\part@nostar{\@ifnextchar[\part@nostar@opt\part@nostar@nopt} % chktex 9
108 \def\part@nostar@nopt#1{\NR@gettitle{#1}\titlesec@part{#1}}
109 \def\part@nostar@opt[#1]#2{\NR@gettitle{#1}\titlesec@part[#1]{#2}}
110 \makeatother
111 \newenvironment{chapterabstract}{\begin{quotation}\em\noindent}{\end{quotation}} %chktex 6
112
113 % Increase the depth for the table of contents
114 \setcounter{secnumdepth}{3}
115 \renewcommand{\contentsname}{Table of Contents} % change the name of the TOC
116 \AtBeginDocument{\addtocontents{toc}{\protect\thispagestyle{empty}}} % to remove page numbering from the TOC
117
118 % (file) structure
119 \usepackage[subpreambles=true]{standalone} % standalone figures
120 %\usepackage{morewrites} % fix no more room for a new \write
121 \usepackage{appendix} % subappendices, appendices per chapter
122
123 % Bibliography
124 \usepackage{natbib} % Cite bib entry completely
125 \setlength{\bibsep}{0.0pt}
126 \def\bibfont{\small}
127 %\bibliographystyle{alpha}
128 \bibliographystyle{abbrvnat}
129 \apptocmd{\thebibliography}{\raggedright}{}{}
130 \usepackage{bibentry} % Cite bib entry completely
131 \nobibliography*
132 \newcommand{\citeentry}[1]{\begin{NoHyper}\bibentry{#1}\end{NoHyper}. \citep{#1}}
133
134 \makeatletter
135 \newcommand{\citepage}[1]{p.~#1}
136 \newcommand{\citepages}[1]{pp.~#1}
137 \newcommand{\citechapter}[1]{\cref@chapter@name~#1}
138 \newcommand{\citechapters}[1]{\cref@chapter@name@plural~#1}
139 \newcommand{\citesection}[1]{\cref@section@name~#1}
140 \newcommand{\citesections}[1]{\cref@section@name@plural~#1}
141 %\newcommand{\citesection}[1]{\S.~#1}
142 %\newcommand{\citesections}[1]{\S\S.~#1}
143 \newcommand{\citeparagraph}[1]{\P.~#1}
144 \newcommand{\citeparagraphs}[1]{\P\P.~#1}
145 \makeatother
146
147 % Graphics
148 \usepackage{graphicx} % Images
149 \graphicspath{{img/},{intro/img},{top/img},{tvt/img}}
150 \usepackage{caption} % subfigures
151 \usepackage{subcaption}
152 \usepackage{rotating}
153 \newcommand{\orcid}[1]{\href{https://orcid.org/#1}{\hspace{1mm}\includegraphics[width=1em]{orcid}\hspace{2mm} https://orcid.org/#1}}
154 \usepackage{tikz}
155
156 % Tables
157 \usepackage{booktabs} % Nicer tables
158 \usepackage{multirow} % Multirow cells
159 \usepackage{tabularx} % Automatically wrapping tables
160 \usepackage{longtable} % Tables spanning pages
161 \usepackage{threeparttable} % Tables with footnotes
162
163 % Code
164 % Pseudocode
165 \usepackage[algochapter,linesnumbered,lined,boxed]{algorithm2e}
166 % Fix the algorithm font
167 \renewcommand\AlCapFnt{\normalfont}
168 \usepackage{listings}
169 % https://tex.stackexchange.com/questions/149056/how-can-i-define-additional-literate-replacements-without-deleting-existing-ones
170 \makeatletter
171 \def\addToLiterate#1{\edef\lst@literate{\unexpanded\expandafter{\lst@literate}\unexpanded{#1}}}
172 \lst@Key{moreliterate}{}{\addToLiterate{#1}}
173 \makeatother
174 % General listings settings
175 \lstset{%
176 basewidth=0.5em,
177 basicstyle=\tt\small,
178 breakatwhitespace=false,
179 breaklines=true,
180 captionpos=b,
181 columns=[c]fixed,
182 commentstyle=\sl,
183 escapeinside={[+}{+]}, % chktex 9
184 frame=L,
185 keepspaces=true,
186 keywordstyle=\bf,
187 postbreak=\mbox{\textcolor{gray}{$\hookrightarrow$}\space},
188 showspaces=false,
189 showstringspaces=false,
190 showtabs=false,
191 stringstyle=\it,
192 tabsize=4,
193 upquote=true,
194 numberstyle=\tiny,
195 }
196 \usepackage{lstlangclean}
197 \usepackage{lstlanghaskell}
198 \usepackage{lstlangarduino}
199 \lstloadlanguages{%
200 {[Arduino]C++},%
201 {c},%
202 {Python},%
203 {Clean},%
204 {[Regular]Haskell},
205 {[Lhs2Tex]Haskell}}
206 \newcommand{\cinline}[1]{\lstinline[language=c,postbreak=]|#1|}
207 \newcommand{\arduinoinline}[1]{\lstinline[language={[Arduino]C++},postbreak=]|#1|}
208 \newcommand{\pythoninline}[1]{\lstinline[language=Python,postbreak=]|#1|}
209 \newcommand{\cleaninline}[1]{\lstinline[language=Clean,postbreak=]|#1|}
210 \newcommand{\cleaninputlisting}[2][]{\renewcommand*{\lstlistingname}{Listing (\gls{CLEAN})}\lstinputlisting[language=Clean,#1]{#2}}
211 \newcommand{\haskellinline}[1]{\lstinline[language={[Regular]Haskell},postbreak=]|#1|}
212 \newcommand{\haskellinputlisting}[2][]{\renewcommand*{\lstlistingname}{Listing (\gls{HASKELL})}\lstinputlisting[language={[Regular]Haskell},#1]{#2}}
213 \newcommand{\haskelllhstexinline}[1]{\lstinline[language={[Lhs2Tex]Haskell},postbreak=]|#1|}
214 %For storing listings in footnotes
215 \newsavebox{\LstBox}
216 % Fix list of listings title
217 \renewcommand{\lstlistlistingname}{List of Listings}
218 % Fix list of listings chapter separator
219 \makeatletter
220 \let\my@chapter\@chapter%
221 \renewcommand*{\@chapter}{%
222 \addtocontents{lol}{\protect\addvspace{10pt}}%
223 \my@chapter}
224 \makeatother
225
226 \lstnewenvironment{lstPython}[1][]
227 {%
228 \lstset{language=Python, #1}
229 \renewcommand*{\lstlistingname}{Listing (\gls{PYTHON})}
230 }
231 {}
232 \lstnewenvironment{lstClean}[1][]
233 {%
234 \lstset{language=Clean, #1}
235 \renewcommand*{\lstlistingname}{Listing (\gls{CLEAN})}
236 }
237 {}
238 \lstnewenvironment{lstArduino}[1][]
239 {%
240 \lstset{language={[Arduino]C++}, #1}
241 \renewcommand*{\lstlistingname}{Listing (\gls{ARDUINO})}
242 }
243 {}
244 \lstnewenvironment{lstHaskell}[1][]
245 {%
246 \lstset{language={[Regular]Haskell},#1}%
247 \renewcommand*{\lstlistingname}{Listing (\gls{HASKELL})}
248 }
249 {}
250 \lstnewenvironment{lstHaskellLhstex}[1][]
251 {%
252 \lstset{language={[Lhs2Tex]Haskell},#1}%
253 \renewcommand*{\lstlistingname}{Listing (\gls{HASKELL})}
254 }
255 {}
256
257 % Hyperlinks and metadata
258 \usepackage[pdflang={en-GB},pagebackref]{hyperref} % hyperlinks
259 \usepackage{xr} % hyperlinks
260 \renewcommand*{\backref}[1]{}
261 \renewcommand*{\backrefalt}[4]{[{%
262 \ifcase #1 not cited.\or p.~#2.\else pp. #2.\fi%chktex 1
263 }]}
264 \hypersetup{%
265 pdftitle={\mytitle},
266 pdfauthor={\myauthor},
267 pdfkeywords={task-oriented programming, functional programming, domain specific languages, internet of things},
268 hidelinks,
269 }
270 \usepackage[nodayofweek]{datetime} % Use a fixed document date
271 \urlstyle{same}
272 \usepackage{bookmark}
273 \usepackage[noabbrev]{cleveref} % Easy references
274 \crefname{part}{episode}{episodes}
275 \crefname{lstlisting}{listing}{listings}
276 \usepackage{nameref} % to reference names of chapters
277 \newcommand{\fullref}[1]{\cref{#1}: \nameref{#1}}
278 \newcommand{\Fullref}[1]{\Cref{#1}: \nameref{#1}}
279 \creflabelformat{equation}{#2\textup{#1}#3}
280
281 % Glossaries and acronyms
282 \usepackage[nolangwarn,abbreviations,nonumberlist,prefix]{glossaries-extra}
283 \setabbreviationstyle[acronym]{long-short}
284 \Addlcwords{of}
285 % Titlecase glossary commands
286 \newcommand{\glst}[1]{\titlecap{\glsentrylong{#1}}}
287 \newcommand{\Glst}[1]{\glst{#1}}
288 \usepackage{glossary-mcols}
289 \pdfstringdefDisableCommands{%
290 \def\glsxtrlong#1{}%
291 \def\glsxtrlongpl#1{}%
292 \def\glsxtrshort#1{}%
293 \def\glsxtrshortpl#1{}%
294 \def\acrfull#1{}%
295 \def\acrfullpl#1{}%
296 \def\Glsxtrlong#1{}%
297 \def\Glsxtrlongpl#1{}%
298 \def\Glsxtrshort#1{}%
299 \def\Glsxtrshortpl#1{}%
300 \def\Acrfull#1{}%
301 \def\Acrfullpl#1{}%
302 \def\gls#1{}%
303 \def\glspl#1{}%
304 \def\glsentrytext#1{}%
305 \def\Gls#1{}%
306 \def\Glspl#1{}%
307 \def\Glsentrytext#1{}%
308 \def\titlecap#1{}%
309 }
310
311 % Index
312 %\usepackage{makeidx}
313 %\makeindex% Enable the index
314
315 % Custom enumerations
316 \usepackage[inline,shortlabels]{enumitem}
317 \setlist{noitemsep}
318 \setlist[description]{leftmargin=\parindent}
319
320 % Initialize the glossaries
321 \makeglossaries%
322 \input{glossaries}
323
324 \usepackage{subfiles}
325
326 \ifSubfilesClassLoaded{}{
327 \usepackage{xmpincl}
328 \includexmp{CC_Attribution-NoDerivatives_4.0_International}
329 }
330
331 % Custom commands
332 \newcommand{\GHCmod}[1]{\texttt{#1}}
333 \newcommand{\requiresGHCmod}[2][]{\footnote{Requires \GHCmod{#2} to be enabled. #1}}
334 %\newcommand{\etc}{{\fontfamily{cmr}\selectfont{\itshape\/\&c}}}
335 \newcommand{\etc}{{\fontfamily{cmr}\selectfont{\itshape\/\&\kern-0.2em c}}}
336 \newcommand{\rdmentry}[5]{#1 (#2): #3. #4.\ \href{https://doi.org/#5}{#5}}
337 \newcommand{\mlubbers}{Lubbers, M.\ (Radboud University)}
338 \newcommand{\pkoopman}{Koopman, dr.\ P.\ (Radboud University)}
339 \newcommand{\rplasmeijer}{Plasmeijer, prof.\ dr.\ ir.\ R.\ (Radboud University)}
340 \newcommand{\aramsingh}{Ramsingh, A.\ (University of Glasgow)}
341 \newcommand{\jsinger}{Singer, dr.\ J.\ (University of Glasgow)}
342 \newcommand{\ptrinder}{Trinder, prof.~dr.\ P.\ (University of Glasgow)}
343
344 \newcommand{\mypart}[3]{
345 \part[#2: #3]{#2\\[2ex]\smaller{}#3}%
346 \label{#1}
347 }